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Han, N.D., Cheng, J., Delannoy-Bruno, O., Webber, D., Terrapon, N., Henrissat, B., Rodionov, D.A., Arzamasov, A.A., Osterman, A.L., Hayashi, D.K., Meynier, A., Vinoy, S., Desai, S., Desai, C., Marion, S., Barratt, M.J., Heath, A.C., and Gordon, J.I. Microbial liberation of N-methylserotonin from orange fiber in gnotobiotic mice and humansCell, 185, 2495-2509 (2022).

Barratt, M.J., Nuzhat, S., Ahsan, K., Frese S.A., Arzamasov, A., Sarker, S.A., Islam, M.M., Palit, P., Islam, M.R., Hibberd, M.C., Nakshatri, S., Cowardin, C.A., Guruge, J.L., Byrne, A.E., Venkatesh, S., Sundaresan, V., Henrick, B., Duar, R., Mitchell, R.D., Casaburi, G., Prambs, J., Flannery, R., Mahfuz, M., Rodionov, D.A., Osterman, A.L., Kyle, D., Ahmed, R., and Gordon, J.I. Bifidobacterium infantis treatment promotes weight gain in Bangladeshi infants with severe acute malnutritionScience Translational Medicine, 14, abk1107 (2022).

Chen, R., Mostafa, I., Hibberd, M.C., Das, S., Mahfuz, M., Naila, N.N., Islam, M.M., Huq, S., Alam, M.A., Zaman, M.U., Raman, A.S., Webber, D., Zhou, C., Sundaresan, V., Ahsan, K., Meier, M.F., Barratt, M.J., Ahmed, T., and Gordon, J.I. A Microbiota-directed food intervention for undernourished children. New Engl. J. Med. 384, 1517-1528 (2021).

Delannoy-Bruno, O., Desai, C., Raman, A.S., Chen, R.Y., Hibberd, M.C., Cheng, J., Han, N., Castillo, J.J., Couture, G., Lebrilla, C.B., Lombard, V., Henrissat, B., Leyn, S.A., Rodionov, D.A., Osterman, A.L., Hayashi, D.K., Meynier, A., Vinoy, S., Kirbach, K., Wilmot, T., Heath, A.C., Klein, S., Barratt, M.J. and Gordon, J.I. Evaluating microbiome-directed fibre snack food prototypes in gnotobiotic mice and humansNature, 595, 91-95 (2021).

Wesener, D.A., Beller, Z.W., Peters, S.L., Rajabi, A., Dimartino, G., Giannone, R.J., Hettich, R.L. and Gordon, J.I.  Microbiota functional activity biosensors for characterizing nutrient utilization in vivoeLife, 10, e64478 (2021).

Chen, R.Y., Kung, V.L., Das, S., Hossain, M.S., Hibberd, M.C., Guruge, J., Mahfuz, M., Begum, S.M.K.N., Rahman, M.M., Fahim, S.M., Gazi, M. A., Haque, R., Sarker, S.A., Mazunder, R.N., Di Luccia, B., Ahsan, K., Kennedy, E., Santiago-Borges, J., Rodionov, D.A., Leyn, S.A., Osterman, A.L., Barratt, M.J., Ahmed, T., and Gordon, J.I. Duodenal microbiota in stunted undernourished children with enteropathyNew Engl. J. Med. 283, 321-333 (2020).

Di Luccia B., Ahern, P.P., Griffin N.W., Cheng, J., Guruge, J.L., Byrne, A.E., Rodionov, D.A., Leyn, S.A., Osterman, A.L., Ahmed T., Colonna, M., Barratt, M.J., Delahaye, N.F., and Gordon, J.I., Oral cholera vaccination response to a combined prebiotic and microbial intervention in a gnotobiotic mouse model of childhood undernutritionCell Host & Microbe 27, 899-908 (2020).

Gehrig, J.L., Venkatesh, S Chang, H-W., Hibberd, M.C., Kung, V.L., Cheng, J., Chen, R.Y., Subramanian, S., Cowardin, C.A., Meier, M., O’Donnell, D., Talcott, M., Spears, L.D., Semenkovich, C.F., Henrissat, B., Giannone, R.J., Hettich, R.L., Ilkayeva, O., Muehlbauer, M., Newgard, C.B., Sawyer, C., Head, R., Rodionov, D.A., Arzamosov, A.A., Leyn, S.A., Osterman, A.L., Hossain, I., Islam, M., Choudhury, N., Sarker, S., Huq, S., Mahmud, I., Mostafa, I., Mahfuz, M., Barratt, M.J., Ahmed, T., and Gordon, J.I., Effects of microbiota-directed foods in gnotobiotic animals and undernourished childrenScience 365, eaau4732 (2019).

Raman, A.S., Gehrig, J.L., Subramanian, S., Venkatesh, M.C. Hibberd, S., Kang, G., Bessong, P.O., Lima, A.A.M., Kosek, M.N., Petri, W.A., Huq, S., Mostafa, I., Islam, M., Mahfuz, M., Haque, R., Ahmed, T., Barratt, M.J., and Gordon, J.I. A sparse covarying unit that describes healthy and impaired human gut microbiota developmentScience 364, eaau4735 (2019).

Patnode, M.L., Beller, Z.W., Han, N.D., Cheng, J., Peters, S.L., Terrapon, N., Henrisssat, B., Le Gall, S., Saulnier, L., Hayashi, D.K., Meynier, A., Vinoy, S., Giannone, R.J., Hettich, R.L., and Gordon, J.I., Interspecies competition impacts targeted manipulation of human gut bacteria by fiber-derived glycansCell 179, 59-73 (2019).