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Supplemental Data


Ley, R. E., M. Hamady, C. Lozupone, P. J. Turnbaugh, R. R. Ramey, J. S. Bircher, M. L. Schlegel, T. A. Tucker, M. D. Schrenzel, R. Knight, and J. I. Gordon. Evolution of Mammals and Their Gut Microbes. Science Express [DOI: 10.1126/science.1155725](22 May 2008) Supplemental Information

Ley, R.E., Turnbaugh, P.J., Klein, S., and Gordon, J.I. Human gut microbes linked to obesity. Nature, 444:1022–1023 (2006). Supplemental Information (ZIP File)

Ley, R. E., Backhed, F., Turnbaugh, P., Lozupone, C. A., Knight, R. D., and Gordon, J. I. Obesity alters gut microbial ecology. Proc. Natl. Acad. Sci. USA, 102: 11070-11075 (2005). Supplemental Information (ZIP File)

Samuel BS, Hansen EE, Manchester JK, Coutinho PM, Henrissat B, Fulton R, Latreille P, Kim K, Wilson RK, Gordon JI. Genomic and metabolic adaptations of Methanobrevibacter smithii to the human gut. Proc Natl Acad Sci USA, 2007 Jun 19;104(25):10643-8. Epub 2007 Jun 11. Supplemental Information

Sonnenburg, J.L., Xu, J., Leip, D.G., Chen, C-H., Westover, B. P., Weatherford, J., Buhler, J.D., and Gordon, J. I. (2005) Glycan foraging in vivo by an intestine-adapted bacterial symbiont, Science, 307, 1955-1959 Supplemental Information

Bäckhed, F., Ley, R.E., Sonnenburg, J.L., Peterson, D.A., and Gordon, J.I. (2005) Host-bacterial mutualism in the human intestine, Science 307:1915-1920. Supplemental Information

Oh, J.D. Karam, S. and Gordon, J.I. (2005) Intracellular Helicobacter pylori in gastric epithelial progenitors, Proc. Natl. Acad. Sci. USA 102: 5186-5191 (2005). Supplemental Information

Syder, A.J.*, Karam, S.M.*, Mills, J.C., Ippolito, J.E., Ansari, H.R., Farook,V., and Gordon, J.I. (2004) A transgenic mouse model of metastatic carcinoma involving trans-differentiation of a gastric epithelial lineage progenitor to a neuroendocrine phenotype. Proc. Natl. Acad. Sci. USA, 101: 4471-4476.  Supplemental Information  (* Both authors contributed equally)

Rawls, J.F., Samuel, B.S., and Gordon, J.I. (2004) Gnotobiotic zebrafish reveal evolutionarily conserved responses to the gut microbiota.  Proc. Natl. Acad. Sci. USA, 101: 4596-4601.  Supplemental Information

Xu, J., Bjursell, M.K., Himrod, J., Deng, S., Carmichael, L.K., Chiang, H.C., Hooper, L.V., and Gordon, J.I. (2003) A Genomic View of the Human-Bacteroides thetaiotaomicron Symbiosis, Science, 299: 2074-2076. Supplemental information

Hooper, L., Wong, M., Thelin, A., Hansson, L., Falk, P., and Gordon, J.I. (2001) Molecular analysis of commensal host-microbial relationships in the intestine, Science, 291: 881-884. Supplemental information

Mills, J.C. and Gordon, J.I. (2001) A new approach for filtering noise from high-density oligonucleotide microarray datasets. Nucleic Acids Research 29(13). Supplemental information